Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 AL138781.1-201ENST00000566567 1274 ntBASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 FP475955.4-201ENST00000623131 1990 ntBASIC17.66■□□□□ 0.42
POLR2J3Q9H1A7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 AC008687.6-201ENST00000596318 630 ntBASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 AC133041.1-202ENST00000642053 222 ntBASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR2J3Q9H1A7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 AC009113.1-201ENST00000570267 2443 ntBASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
POLR2J3Q9H1A7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms