Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
SLIRPQ9GZT3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLIRPQ9GZT3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLIRPQ9GZT3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 CYP21A1P-202ENST00000354927 1481 ntBASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SLIRPQ9GZT3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 HLA-G-202ENST00000376815 851 ntBASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 HLA-G-203ENST00000376818 1127 ntBASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 MIR572-201ENST00000384983 95 ntBASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 YBX1P1-201ENST00000445822 960 ntBASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 FEM1AP3-201ENST00000403722 1741 ntBASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLIRPQ9GZT3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4L2-201ENST00000561772 1275 ntBASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4L6-201ENST00000626483 1275 ntBASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4L1-201ENST00000627662 1275 ntBASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4L8-201ENST00000629013 1275 ntBASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4L3-201ENST00000630187 1275 ntBASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4L7-201ENST00000630678 1275 ntBASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DUX4L5-201ENST00000630834 1275 ntBASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.81■□□□□ 0.28
SLIRPQ9GZT3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms