Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM4Q9C037 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TRIM4Q9C037 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.02■□□□□ 0.64
TRIM4Q9C037 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM4Q9C037 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TRIM4Q9C037 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM4Q9C037 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM4Q9C037 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM4Q9C037 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM4Q9C037 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM4Q9C037 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM4Q9C037 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM4Q9C037 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM4Q9C037 CYP21A1P-202ENST00000354927 1481 ntBASIC19.02■□□□□ 0.63
TRIM4Q9C037 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM4Q9C037 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM4Q9C037 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM4Q9C037 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM4Q9C037 AC092368.3-202ENST00000574180 1591 ntBASIC19.02■□□□□ 0.63
TRIM4Q9C037 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 DPP3P2-201ENST00000416030 1696 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 AC087633.2-202ENST00000565166 1439 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 RPS2P55-201ENST00000397318 883 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 AC012618.2-201ENST00000428058 849 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 AC107956.1-201ENST00000494359 873 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 AL162412.1-201ENST00000567129 965 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 AC233702.5-201ENST00000584107 538 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 AC018470.1-201ENST00000624790 3129 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM4Q9C037 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM4Q9C037 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.01■□□□□ 0.63
TRIM4Q9C037 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19■□□□□ 0.63
TRIM4Q9C037 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19■□□□□ 0.63
TRIM4Q9C037 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19■□□□□ 0.63
TRIM4Q9C037 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19■□□□□ 0.63
TRIM4Q9C037 SOX15-203ENST00000570788 1093 ntBASIC19■□□□□ 0.63
TRIM4Q9C037 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19■□□□□ 0.63
TRIM4Q9C037 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19■□□□□ 0.63
TRIM4Q9C037 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM4Q9C037 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 AC125437.2-201ENST00000625180 2167 ntBASIC19■□□□□ 0.63
TRIM4Q9C037 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TRIM4Q9C037 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM4Q9C037 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM4Q9C037 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM4Q9C037 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM4Q9C037 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM4Q9C037 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms