Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AP003733.1-201ENST00000491725 852 ntBASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 AL592071.1-201ENST00000611956 408 ntBASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
LRFN3Q9BTN0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 MIR5100-201ENST00000579544 119 ntBASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.09■□□□□ 0.65
LRFN3Q9BTN0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN3Q9BTN0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.08■□□□□ 0.65
LRFN3Q9BTN0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN3Q9BTN0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.08■□□□□ 0.65
LRFN3Q9BTN0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.08■□□□□ 0.64
LRFN3Q9BTN0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 AC091607.1-201ENST00000490318 1060 ntBASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 SNHG9-202ENST00000564014 471 ntBASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN3Q9BTN0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 AC132008.2-207ENST00000454517 770 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms