Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 KRT8P11-201ENST00000409686 1436 ntBASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 AC097488.1-201ENST00000507834 756 ntBASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 PRSS44-201ENST00000515154 1146 ntBASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2Q9BSQ5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 SLC25A1P4-201ENST00000567977 778 ntBASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2Q9BSQ5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2Q9BSQ5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms