Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS1Q99742 B3GAT3P1-201ENST00000471720 806 ntBASIC17.42■□□□□ 0.38
NPAS1Q99742 AC091390.4-202ENST00000476426 537 ntBASIC17.42■□□□□ 0.38
NPAS1Q99742 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NPAS1Q99742 AP003071.4-201ENST00000562276 1284 ntBASIC17.42■□□□□ 0.38
NPAS1Q99742 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.42■□□□□ 0.38
NPAS1Q99742 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS1Q99742 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS1Q99742 AP001412.1-201ENST00000608405 714 ntBASIC17.42■□□□□ 0.38
NPAS1Q99742 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.42■□□□□ 0.38
NPAS1Q99742 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS1Q99742 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS1Q99742 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS1Q99742 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS1Q99742 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPAS1Q99742 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS1Q99742 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS1Q99742 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NPAS1Q99742 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.41■□□□□ 0.38
NPAS1Q99742 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.41■□□□□ 0.38
NPAS1Q99742 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS1Q99742 AL355075.4-201ENST00000554988 638 ntBASIC17.41■□□□□ 0.38
NPAS1Q99742 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NPAS1Q99742 MIR6786-201ENST00000616843 113 ntBASIC17.41■□□□□ 0.38
NPAS1Q99742 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS1Q99742 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS1Q99742 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.41■□□□□ 0.38
NPAS1Q99742 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NPAS1Q99742 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NPAS1Q99742 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS1Q99742 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NPAS1Q99742 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.4■□□□□ 0.38
NPAS1Q99742 AL355355.2-201ENST00000442321 338 ntBASIC17.4■□□□□ 0.38
NPAS1Q99742 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 AC116562.2-201ENST00000507042 360 ntBASIC17.4■□□□□ 0.38
NPAS1Q99742 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NPAS1Q99742 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS1Q99742 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS1Q99742 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NPAS1Q99742 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
NPAS1Q99742 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPAS1Q99742 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPAS1Q99742 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS1Q99742 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS1Q99742 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS1Q99742 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS1Q99742 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS1Q99742 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.39■□□□□ 0.37
NPAS1Q99742 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS1Q99742 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS1Q99742 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS1Q99742 AC011298.2-201ENST00000617989 482 ntBASIC17.39■□□□□ 0.37
NPAS1Q99742 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS1Q99742 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS1Q99742 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS1Q99742 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
NPAS1Q99742 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS1Q99742 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NPAS1Q99742 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NPAS1Q99742 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NPAS1Q99742 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS1Q99742 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms