Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 B3GAT3P1-201ENST00000471720 806 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.61■□□□□ 0.57
PKP4Q99569 MIR6786-201ENST00000616843 113 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 AC011298.2-201ENST00000617989 482 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 AC130371.2-201ENST00000619443 611 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.61■□□□□ 0.57
PKP4Q99569 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.6■□□□□ 0.57
PKP4Q99569 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PKP4Q99569 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.6■□□□□ 0.57
PKP4Q99569 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.6■□□□□ 0.57
PKP4Q99569 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PKP4Q99569 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.6■□□□□ 0.57
PKP4Q99569 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PKP4Q99569 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.6■□□□□ 0.57
PKP4Q99569 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.6■□□□□ 0.57
PKP4Q99569 NUDT16P1-203ENST00000513809 620 ntBASIC18.6■□□□□ 0.57
PKP4Q99569 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.6■□□□□ 0.57
PKP4Q99569 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.6■□□□□ 0.57
PKP4Q99569 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PKP4Q99569 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKP4Q99569 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.59■□□□□ 0.57
PKP4Q99569 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.59■□□□□ 0.57
PKP4Q99569 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PKP4Q99569 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.59■□□□□ 0.57
PKP4Q99569 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.59■□□□□ 0.57
PKP4Q99569 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.59■□□□□ 0.57
PKP4Q99569 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.59■□□□□ 0.57
PKP4Q99569 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.59■□□□□ 0.57
PKP4Q99569 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.59■□□□□ 0.57
PKP4Q99569 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PKP4Q99569 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.59■□□□□ 0.57
PKP4Q99569 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PKP4Q99569 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKP4Q99569 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.58■□□□□ 0.57
PKP4Q99569 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.58■□□□□ 0.57
PKP4Q99569 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.58■□□□□ 0.57
PKP4Q99569 AL049812.1-201ENST00000432563 2267 ntBASIC18.58■□□□□ 0.57
PKP4Q99569 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 KRT8P11-201ENST00000409686 1436 ntBASIC18.58■□□□□ 0.57
PKP4Q99569 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKP4Q99569 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.58■□□□□ 0.56
PKP4Q99569 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKP4Q99569 TSPY7P-201ENST00000431358 1114 ntBASIC18.58■□□□□ 0.56
PKP4Q99569 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKP4Q99569 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.58■□□□□ 0.56
PKP4Q99569 AC116562.2-201ENST00000507042 360 ntBASIC18.58■□□□□ 0.56
PKP4Q99569 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.58■□□□□ 0.56
PKP4Q99569 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.58■□□□□ 0.56
PKP4Q99569 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.58■□□□□ 0.56
PKP4Q99569 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.58■□□□□ 0.56
PKP4Q99569 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.58■□□□□ 0.56
PKP4Q99569 AC026471.5-201ENST00000615068 467 ntBASIC18.58■□□□□ 0.56
PKP4Q99569 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKP4Q99569 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PKP4Q99569 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PKP4Q99569 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PKP4Q99569 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PKP4Q99569 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKP4Q99569 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PKP4Q99569 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PKP4Q99569 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.58■□□□□ 0.56
PKP4Q99569 FSCN1P1-201ENST00000568912 1481 ntBASIC18.58■□□□□ 0.56
PKP4Q99569 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms