Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 LINC01465-201ENST00000408887 1940 ntBASIC17.37■□□□□ 0.37
SNX18Q96RF0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 ZNF815P-204ENST00000434898 1737 ntBASIC17.36■□□□□ 0.37
SNX18Q96RF0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 YBX1P10-201ENST00000444752 975 ntBASIC17.36■□□□□ 0.37
SNX18Q96RF0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.36■□□□□ 0.37
SNX18Q96RF0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 AC135050.7-201ENST00000624508 2218 ntBASIC17.36■□□□□ 0.37
SNX18Q96RF0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX18Q96RF0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX18Q96RF0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 PRORSD1P-202ENST00000563365 2154 ntBASIC17.35■□□□□ 0.37
SNX18Q96RF0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 AC006557.6-201ENST00000623071 864 ntBASIC17.35■□□□□ 0.37
SNX18Q96RF0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 AC092368.3-202ENST00000574180 1591 ntBASIC17.35■□□□□ 0.37
SNX18Q96RF0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX18Q96RF0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX18Q96RF0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 AIRN-201ENST00000601203 4374 ntBASIC17.34■□□□□ 0.37
SNX18Q96RF0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 ITM2C-210ENST00000620962 501 ntBASIC17.34■□□□□ 0.37
SNX18Q96RF0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNX18Q96RF0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX18Q96RF0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SNX18Q96RF0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
SNX18Q96RF0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms