Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.87□□□□□ -0.03
DUX3Q96PT4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 AP000692.2-201ENST00000608391 879 ntBASIC14.87□□□□□ -0.03
DUX3Q96PT4 DGCR10-201ENST00000609839 495 ntBASIC14.87□□□□□ -0.03
DUX3Q96PT4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 AL137013.1-201ENST00000432946 1228 ntBASIC14.86□□□□□ -0.03
DUX3Q96PT4 SLC25A3P1-201ENST00000443844 931 ntBASIC14.86□□□□□ -0.03
DUX3Q96PT4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
DUX3Q96PT4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUX3Q96PT4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 AC113347.1-201ENST00000413321 391 ntBASIC14.85□□□□□ -0.03
DUX3Q96PT4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 AC010203.1-204ENST00000548782 407 ntBASIC14.85□□□□□ -0.03
DUX3Q96PT4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 AP005242.2-201ENST00000580065 1175 ntBASIC14.85□□□□□ -0.03
DUX3Q96PT4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.85□□□□□ -0.03
DUX3Q96PT4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUX3Q96PT4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DUX3Q96PT4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DUX3Q96PT4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUX3Q96PT4 TERF1P1-201ENST00000311003 1181 ntBASIC14.84□□□□□ -0.03
DUX3Q96PT4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 AC092865.7-201ENST00000641832 219 ntBASIC14.84□□□□□ -0.03
DUX3Q96PT4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUX3Q96PT4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
DUX3Q96PT4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DUX3Q96PT4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms