Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
SNX27Q96L92 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX27Q96L92 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SNX27Q96L92 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SNX27Q96L92 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SNX27Q96L92 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.63■□□□□ 0.89
SNX27Q96L92 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.63■□□□□ 0.89
SNX27Q96L92 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.63■□□□□ 0.89
SNX27Q96L92 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX27Q96L92 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.63■□□□□ 0.89
SNX27Q96L92 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.63■□□□□ 0.89
SNX27Q96L92 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.63■□□□□ 0.89
SNX27Q96L92 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.62■□□□□ 0.89
SNX27Q96L92 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.62■□□□□ 0.89
SNX27Q96L92 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.62■□□□□ 0.89
SNX27Q96L92 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX27Q96L92 TEX21P-204ENST00000641479 1693 ntBASIC20.62■□□□□ 0.89
SNX27Q96L92 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SNX27Q96L92 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.62■□□□□ 0.89
SNX27Q96L92 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX27Q96L92 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.62■□□□□ 0.89
SNX27Q96L92 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX27Q96L92 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 AP003041.3-201ENST00000527151 707 ntBASIC20.62■□□□□ 0.89
SNX27Q96L92 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX27Q96L92 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SNX27Q96L92 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX27Q96L92 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.62■□□□□ 0.89
SNX27Q96L92 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX27Q96L92 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SNX27Q96L92 AL450487.1-201ENST00000426799 995 ntBASIC20.61■□□□□ 0.89
SNX27Q96L92 LIN28AP1-201ENST00000429574 405 ntBASIC20.61■□□□□ 0.89
SNX27Q96L92 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX27Q96L92 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.61■□□□□ 0.89
SNX27Q96L92 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.61■□□□□ 0.89
SNX27Q96L92 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.61■□□□□ 0.89
SNX27Q96L92 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX27Q96L92 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.61■□□□□ 0.89
SNX27Q96L92 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SNX27Q96L92 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SNX27Q96L92 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX27Q96L92 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX27Q96L92 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SNX27Q96L92 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.6■□□□□ 0.89
SNX27Q96L92 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SNX27Q96L92 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX27Q96L92 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.6■□□□□ 0.89
SNX27Q96L92 ATP5G1P1-201ENST00000448724 379 ntBASIC20.6■□□□□ 0.89
SNX27Q96L92 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.6■□□□□ 0.89
SNX27Q96L92 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
SNX27Q96L92 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.6■□□□□ 0.89
SNX27Q96L92 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SNX27Q96L92 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.6■□□□□ 0.89
SNX27Q96L92 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SNX27Q96L92 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms