Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 AP000867.3-201ENST00000524675 377 ntBASIC16.2■□□□□ 0.18
SPG11Q96JI7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPG11Q96JI7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SPG11Q96JI7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 AC091304.2-201ENST00000564639 760 ntBASIC16.19■□□□□ 0.18
SPG11Q96JI7 MIR4674-201ENST00000582457 87 ntBASIC16.19■□□□□ 0.18
SPG11Q96JI7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 KRT18P13-201ENST00000400056 1290 ntBASIC16.19■□□□□ 0.18
SPG11Q96JI7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SPG11Q96JI7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 AF228730.7-201ENST00000641842 219 ntBASIC16.19■□□□□ 0.18
SPG11Q96JI7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPG11Q96JI7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 TSSC2-201ENST00000450217 709 ntBASIC16.18■□□□□ 0.18
SPG11Q96JI7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.18■□□□□ 0.18
SPG11Q96JI7 TPSP2-201ENST00000561760 610 ntBASIC16.18■□□□□ 0.18
SPG11Q96JI7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPG11Q96JI7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 LINC00167-201ENST00000530583 1419 ntBASIC16.17■□□□□ 0.18
SPG11Q96JI7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 AP002414.4-201ENST00000589764 1148 ntBASIC16.17■□□□□ 0.18
SPG11Q96JI7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms