Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.3■□□□□ 0.68
SHDQ96IW2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.3■□□□□ 0.68
SHDQ96IW2 AL662844.1-201ENST00000546340 181 ntBASIC19.3■□□□□ 0.68
SHDQ96IW2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.3■□□□□ 0.68
SHDQ96IW2 AC012615.1-201ENST00000565797 1299 ntBASIC19.3■□□□□ 0.68
SHDQ96IW2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.3■□□□□ 0.68
SHDQ96IW2 AC104692.2-201ENST00000603054 253 ntBASIC19.3■□□□□ 0.68
SHDQ96IW2 AC004263.2-201ENST00000617183 678 ntBASIC19.3■□□□□ 0.68
SHDQ96IW2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.3■□□□□ 0.68
SHDQ96IW2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.3■□□□□ 0.68
SHDQ96IW2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.3■□□□□ 0.68
SHDQ96IW2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHDQ96IW2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.29■□□□□ 0.68
SHDQ96IW2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SHDQ96IW2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.29■□□□□ 0.68
SHDQ96IW2 LINC00265-3P-201ENST00000447588 903 ntBASIC19.29■□□□□ 0.68
SHDQ96IW2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.29■□□□□ 0.68
SHDQ96IW2 MIR3180-5-201ENST00000583743 153 ntBASIC19.29■□□□□ 0.68
SHDQ96IW2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 AL136038.4-201ENST00000603606 1261 ntBASIC19.29■□□□□ 0.68
SHDQ96IW2 AL732292.2-201ENST00000609649 430 ntBASIC19.29■□□□□ 0.68
SHDQ96IW2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.29■□□□□ 0.68
SHDQ96IW2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.29■□□□□ 0.68
SHDQ96IW2 GPAT2P1-201ENST00000444924 1672 ntBASIC19.29■□□□□ 0.68
SHDQ96IW2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.29■□□□□ 0.68
SHDQ96IW2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHDQ96IW2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SHDQ96IW2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SHDQ96IW2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.28■□□□□ 0.68
SHDQ96IW2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
SHDQ96IW2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.28■□□□□ 0.68
SHDQ96IW2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.28■□□□□ 0.68
SHDQ96IW2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.28■□□□□ 0.68
SHDQ96IW2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.28■□□□□ 0.68
SHDQ96IW2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHDQ96IW2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SHDQ96IW2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHDQ96IW2 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.68
SHDQ96IW2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHDQ96IW2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SHDQ96IW2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.27■□□□□ 0.68
SHDQ96IW2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SHDQ96IW2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.27■□□□□ 0.68
SHDQ96IW2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHDQ96IW2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHDQ96IW2 AL023284.2-201ENST00000405850 579 ntBASIC19.27■□□□□ 0.68
SHDQ96IW2 MCCD1P1-208ENST00000445732 328 ntBASIC19.27■□□□□ 0.68
SHDQ96IW2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.27■□□□□ 0.68
SHDQ96IW2 KRT18P31-201ENST00000506277 1292 ntBASIC19.27■□□□□ 0.68
SHDQ96IW2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHDQ96IW2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.27■□□□□ 0.68
SHDQ96IW2 TPSP2-201ENST00000561760 610 ntBASIC19.27■□□□□ 0.68
SHDQ96IW2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.27■□□□□ 0.68
SHDQ96IW2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SHDQ96IW2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHDQ96IW2 AC112497.1-201ENST00000624824 639 ntBASIC19.27■□□□□ 0.68
SHDQ96IW2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SHDQ96IW2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SHDQ96IW2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SHDQ96IW2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SHDQ96IW2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SHDQ96IW2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SHDQ96IW2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.26■□□□□ 0.67
SHDQ96IW2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.26■□□□□ 0.67
SHDQ96IW2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SHDQ96IW2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SHDQ96IW2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHDQ96IW2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHDQ96IW2 AP000593.1-201ENST00000393668 712 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms