Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX11Q96FC9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
DDX11Q96FC9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX11Q96FC9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX11Q96FC9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 AC079598.2-202ENST00000546624 1451 ntBASIC22.67■■□□□ 1.22
DDX11Q96FC9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 AP000525.1-201ENST00000608286 694 ntBASIC22.67■■□□□ 1.22
DDX11Q96FC9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX11Q96FC9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX11Q96FC9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX11Q96FC9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
DDX11Q96FC9 KRT16P1-201ENST00000399124 1418 ntBASIC22.65■■□□□ 1.22
DDX11Q96FC9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 AL020996.1-203ENST00000536896 2307 ntBASIC22.65■■□□□ 1.22
DDX11Q96FC9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 MIR1238-201ENST00000408483 83 ntBASIC22.65■■□□□ 1.22
DDX11Q96FC9 YBX1P10-201ENST00000444752 975 ntBASIC22.65■■□□□ 1.22
DDX11Q96FC9 MIR6786-201ENST00000616843 113 ntBASIC22.65■■□□□ 1.22
DDX11Q96FC9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 ZNF815P-204ENST00000434898 1737 ntBASIC22.65■■□□□ 1.22
DDX11Q96FC9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX11Q96FC9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX11Q96FC9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX11Q96FC9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX11Q96FC9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.64■■□□□ 1.22
DDX11Q96FC9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
DDX11Q96FC9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
DDX11Q96FC9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX11Q96FC9 TMPOP1-202ENST00000424642 1267 ntBASIC22.64■■□□□ 1.21
DDX11Q96FC9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.64■■□□□ 1.21
DDX11Q96FC9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.64■■□□□ 1.21
DDX11Q96FC9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX11Q96FC9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
DDX11Q96FC9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
DDX11Q96FC9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
DDX11Q96FC9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX11Q96FC9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX11Q96FC9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX11Q96FC9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.63■■□□□ 1.21
DDX11Q96FC9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms