Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 AC124016.1-201ENST00000609552 612 ntBASIC20.21■□□□□ 0.83
TRIM11Q96F44 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM11Q96F44 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM11Q96F44 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
TRIM11Q96F44 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.2■□□□□ 0.82
TRIM11Q96F44 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 AC110285.5-201ENST00000611501 352 ntBASIC20.2■□□□□ 0.82
TRIM11Q96F44 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM11Q96F44 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRIM11Q96F44 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 TSPY23P-201ENST00000440136 739 ntBASIC20.19■□□□□ 0.82
TRIM11Q96F44 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 RN7SL471P-201ENST00000580476 299 ntBASIC20.19■□□□□ 0.82
TRIM11Q96F44 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM11Q96F44 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM11Q96F44 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 Z98044.1-201ENST00000632503 1764 ntBASIC20.18■□□□□ 0.82
TRIM11Q96F44 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM11Q96F44 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.18■□□□□ 0.82
TRIM11Q96F44 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRIM11Q96F44 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms