Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 AL160286.2-201ENST00000567150 934 ntBASIC19.3■□□□□ 0.68
LRRC39Q96DD0 AC142086.2-201ENST00000569753 217 ntBASIC19.3■□□□□ 0.68
LRRC39Q96DD0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC39Q96DD0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.29■□□□□ 0.68
LRRC39Q96DD0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 C1QL1P1-201ENST00000568105 661 ntBASIC19.29■□□□□ 0.68
LRRC39Q96DD0 AL109923.1-201ENST00000618799 583 ntBASIC19.29■□□□□ 0.68
LRRC39Q96DD0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 AC135050.7-201ENST00000624508 2218 ntBASIC19.29■□□□□ 0.68
LRRC39Q96DD0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 AC104581.1-202ENST00000635932 2618 ntBASIC19.29■□□□□ 0.68
LRRC39Q96DD0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC39Q96DD0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 MIR935-201ENST00000401179 91 ntBASIC19.28■□□□□ 0.68
LRRC39Q96DD0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.28■□□□□ 0.68
LRRC39Q96DD0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 ANO7L1-203ENST00000602586 1720 ntBASIC19.28■□□□□ 0.68
LRRC39Q96DD0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC39Q96DD0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms