Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 ID1-201ENST00000376105 1233 ntBASIC20.07■□□□□ 0.8
RNF25Q96BH1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF25Q96BH1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF25Q96BH1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 AC006333.2-201ENST00000607957 2099 ntBASIC20.06■□□□□ 0.8
RNF25Q96BH1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF25Q96BH1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF25Q96BH1 AC104581.1-202ENST00000635932 2618 ntBASIC20.06■□□□□ 0.8
RNF25Q96BH1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 PRKY-204ENST00000533551 1019 ntBASIC20.05■□□□□ 0.8
RNF25Q96BH1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF25Q96BH1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF25Q96BH1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms