Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 TOB2P1-201ENST00000469761 992 ntBASIC19.1■□□□□ 0.65
CLDN23Q96B33 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 AC112497.1-201ENST00000624824 639 ntBASIC19.1■□□□□ 0.65
CLDN23Q96B33 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN23Q96B33 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN23Q96B33 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 AL691432.2-201ENST00000607222 2038 ntBASIC19.09■□□□□ 0.65
CLDN23Q96B33 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 MCCD1P1-208ENST00000445732 328 ntBASIC19.09■□□□□ 0.65
CLDN23Q96B33 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN23Q96B33 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN23Q96B33 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN23Q96B33 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CLDN23Q96B33 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN23Q96B33 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CLDN23Q96B33 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN23Q96B33 AC020907.5-201ENST00000624372 1936 ntBASIC19.08■□□□□ 0.65
CLDN23Q96B33 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN23Q96B33 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CLDN23Q96B33 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN23Q96B33 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN23Q96B33 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN23Q96B33 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN23Q96B33 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN23Q96B33 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN23Q96B33 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN23Q96B33 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 AL121912.1-201ENST00000603683 238 ntBASIC19.08■□□□□ 0.64
CLDN23Q96B33 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLDN23Q96B33 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN23Q96B33 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 AP005212.1-201ENST00000581547 1997 ntBASIC19.07■□□□□ 0.64
CLDN23Q96B33 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN23Q96B33 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN23Q96B33 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms