Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 MIR718-201ENST00000390190 70 ntBASIC16.85■□□□□ 0.29
TMEM54Q969K7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM54Q969K7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM54Q969K7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 AP000692.2-201ENST00000608391 879 ntBASIC16.84■□□□□ 0.29
TMEM54Q969K7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 AP006294.2-201ENST00000641667 209 ntBASIC16.84■□□□□ 0.29
TMEM54Q969K7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM54Q969K7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM54Q969K7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TMEM54Q969K7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 TNXA-203ENST00000507684 2038 ntBASIC16.83■□□□□ 0.28
TMEM54Q969K7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.83■□□□□ 0.28
TMEM54Q969K7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM54Q969K7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms