Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ATP6V0A1Q93050 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP6V0A1Q93050 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP6V0A1Q93050 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP6V0A1Q93050 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
ATP6V0A1Q93050 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 RNF152P1-201ENST00000397754 604 ntBASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 CA15P1-201ENST00000481698 905 ntBASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 AL353719.1-201ENST00000566847 864 ntBASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.39■■□□□ 1.01
ATP6V0A1Q93050 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 YBX1P2-201ENST00000489612 999 ntBASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.38■■□□□ 1.01
ATP6V0A1Q93050 AL158211.5-201ENST00000623583 2518 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 AFG3L1P-217ENST00000557444 2447 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 Z82202.1-201ENST00000623446 1880 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 TSPY23P-201ENST00000440136 739 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms