Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA4DQ92854 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA4DQ92854 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA4DQ92854 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA4DQ92854 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA4DQ92854 AC116562.2-201ENST00000507042 360 ntBASIC20.57■□□□□ 0.88
SEMA4DQ92854 TNXA-203ENST00000507684 2038 ntBASIC20.57■□□□□ 0.88
SEMA4DQ92854 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA4DQ92854 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 TSPY7P-201ENST00000431358 1114 ntBASIC20.56■□□□□ 0.88
SEMA4DQ92854 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SEMA4DQ92854 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA4DQ92854 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 AC006333.2-201ENST00000607957 2099 ntBASIC20.55■□□□□ 0.88
SEMA4DQ92854 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 AP001412.1-201ENST00000608405 714 ntBASIC20.55■□□□□ 0.88
SEMA4DQ92854 REXO1L10P-201ENST00000615707 1290 ntBASIC20.55■□□□□ 0.88
SEMA4DQ92854 REXO1L12P-201ENST00000622156 912 ntBASIC20.55■□□□□ 0.88
SEMA4DQ92854 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.55■□□□□ 0.88
SEMA4DQ92854 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA4DQ92854 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 AC026471.5-201ENST00000615068 467 ntBASIC20.54■□□□□ 0.88
SEMA4DQ92854 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 FSCN1P1-201ENST00000568912 1481 ntBASIC20.54■□□□□ 0.88
SEMA4DQ92854 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
SEMA4DQ92854 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA4DQ92854 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
SEMA4DQ92854 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.53■□□□□ 0.88
SEMA4DQ92854 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA4DQ92854 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms