Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 AL121832.2-201ENST00000610979 668 ntBASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 AL121829.2-201ENST00000620908 328 ntBASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC44A1Q8WWI5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 NOC2LP1-202ENST00000452600 2235 ntBASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 AC120498.8-201ENST00000614275 531 ntBASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 MYC-209ENST00000641252 345 ntBASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC44A1Q8WWI5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC44A1Q8WWI5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC44A1Q8WWI5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC44A1Q8WWI5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SLC44A1Q8WWI5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 AC018470.1-201ENST00000624790 3129 ntBASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC44A1Q8WWI5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms