Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 FEM1AP3-201ENST00000403722 1741 ntBASIC22.54■■□□□ 1.2
STAG1Q8WVM7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.53■■□□□ 1.2
STAG1Q8WVM7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 CA15P1-201ENST00000481698 905 ntBASIC22.53■■□□□ 1.2
STAG1Q8WVM7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
STAG1Q8WVM7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 TSPY14P-201ENST00000303979 915 ntBASIC22.52■■□□□ 1.2
STAG1Q8WVM7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
STAG1Q8WVM7 FP475955.4-201ENST00000623131 1990 ntBASIC22.52■■□□□ 1.2
STAG1Q8WVM7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
STAG1Q8WVM7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 C2orf69P3-201ENST00000565542 1120 ntBASIC22.51■■□□□ 1.19
STAG1Q8WVM7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
STAG1Q8WVM7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 AL023803.3-201ENST00000615559 522 ntBASIC22.5■■□□□ 1.19
STAG1Q8WVM7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
STAG1Q8WVM7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.49■■□□□ 1.19
STAG1Q8WVM7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
STAG1Q8WVM7 SLC25A1P2-201ENST00000430693 912 ntBASIC22.49■■□□□ 1.19
STAG1Q8WVM7 EGLN1P1-201ENST00000531623 762 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms