Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF217Q8TC41 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF217Q8TC41 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF217Q8TC41 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF217Q8TC41 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF217Q8TC41 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF217Q8TC41 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 AL691432.2-201ENST00000607222 2038 ntBASIC18.35■□□□□ 0.53
RNF217Q8TC41 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 CNN2P6-201ENST00000439038 900 ntBASIC18.35■□□□□ 0.53
RNF217Q8TC41 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF217Q8TC41 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
RNF217Q8TC41 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 AC006015.1-201ENST00000429970 570 ntBASIC18.34■□□□□ 0.53
RNF217Q8TC41 CYP2T1P-201ENST00000432607 1285 ntBASIC18.34■□□□□ 0.53
RNF217Q8TC41 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 AC231657.2-201ENST00000624556 255 ntBASIC18.34■□□□□ 0.53
RNF217Q8TC41 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF217Q8TC41 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF217Q8TC41 BX119927.1-201ENST00000636596 1552 ntBASIC18.34■□□□□ 0.53
RNF217Q8TC41 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF217Q8TC41 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF217Q8TC41 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF217Q8TC41 AL662844.4-201ENST00000606367 2838 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms