Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 INGX-201ENST00000359239 846 ntBASIC20.56■□□□□ 0.88
BEST2Q8NFU1 AC005521.1-201ENST00000393351 872 ntBASIC20.56■□□□□ 0.88
BEST2Q8NFU1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 AL023803.3-201ENST00000615559 522 ntBASIC20.56■□□□□ 0.88
BEST2Q8NFU1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BEST2Q8NFU1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 AC092338.2-201ENST00000568827 1415 ntBASIC20.55■□□□□ 0.88
BEST2Q8NFU1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 AL353719.1-201ENST00000566847 864 ntBASIC20.55■□□□□ 0.88
BEST2Q8NFU1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 AC010653.2-201ENST00000623505 997 ntBASIC20.55■□□□□ 0.88
BEST2Q8NFU1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.55■□□□□ 0.88
BEST2Q8NFU1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.55■□□□□ 0.88
BEST2Q8NFU1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BEST2Q8NFU1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 TERF1P1-201ENST00000311003 1181 ntBASIC20.54■□□□□ 0.88
BEST2Q8NFU1 AC007663.1-201ENST00000438948 1240 ntBASIC20.54■□□□□ 0.88
BEST2Q8NFU1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 FAM87A-204ENST00000613235 858 ntBASIC20.54■□□□□ 0.88
BEST2Q8NFU1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BEST2Q8NFU1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 HMGA1P5-201ENST00000412453 271 ntBASIC20.53■□□□□ 0.88
BEST2Q8NFU1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 AL137013.1-201ENST00000432946 1228 ntBASIC20.53■□□□□ 0.88
BEST2Q8NFU1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST2Q8NFU1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 TEX21P-204ENST00000641479 1693 ntBASIC20.52■□□□□ 0.88
BEST2Q8NFU1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms