Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 AC073195.1-201ENST00000607241 877 ntBASIC19.65■□□□□ 0.74
PAF1Q8N7H5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PAF1Q8N7H5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.64■□□□□ 0.74
PAF1Q8N7H5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PAF1Q8N7H5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PAF1Q8N7H5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.64■□□□□ 0.74
PAF1Q8N7H5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 FAM197Y1-201ENST00000421178 764 ntBASIC19.64■□□□□ 0.73
PAF1Q8N7H5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 SNORA78-201ENST00000459373 127 ntBASIC19.64■□□□□ 0.73
PAF1Q8N7H5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 AL049637.2-201ENST00000641778 930 ntBASIC19.64■□□□□ 0.73
PAF1Q8N7H5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAF1Q8N7H5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 AC233702.5-201ENST00000584107 538 ntBASIC19.63■□□□□ 0.73
PAF1Q8N7H5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAF1Q8N7H5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 NIFKP9-201ENST00000419265 221 ntBASIC19.62■□□□□ 0.73
PAF1Q8N7H5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 AL355355.2-201ENST00000442321 338 ntBASIC19.62■□□□□ 0.73
PAF1Q8N7H5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 CD177P1-201ENST00000606252 935 ntBASIC19.62■□□□□ 0.73
PAF1Q8N7H5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAF1Q8N7H5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 KRT16P1-201ENST00000399124 1418 ntBASIC19.61■□□□□ 0.73
PAF1Q8N7H5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms