Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 FEM1AP3-201ENST00000403722 1741 ntBASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 IRX1P1-201ENST00000438849 1838 ntBASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 CYP2D8P-201ENST00000433633 1490 ntBASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAM1L1Q8N609 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAM1L1Q8N609 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 AC010947.1-201ENST00000623454 693 ntBASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 FP475955.4-201ENST00000623131 1990 ntBASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAM1L1Q8N609 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 TSPY14P-201ENST00000303979 915 ntBASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 SLC25A1P2-201ENST00000430693 912 ntBASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRAM1L1Q8N609 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 EGLN1P1-201ENST00000531623 762 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms