Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 AP000523.1-201ENST00000398242 1049 ntBASIC21.04■□□□□ 0.96
NME8Q8N427 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 AL031133.1-201ENST00000406807 723 ntBASIC21.04■□□□□ 0.96
NME8Q8N427 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.04■□□□□ 0.96
NME8Q8N427 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.04■□□□□ 0.96
NME8Q8N427 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.04■□□□□ 0.96
NME8Q8N427 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.04■□□□□ 0.96
NME8Q8N427 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.04■□□□□ 0.96
NME8Q8N427 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 KRT8P45-201ENST00000414328 1447 ntBASIC21.04■□□□□ 0.96
NME8Q8N427 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.04■□□□□ 0.96
NME8Q8N427 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NME8Q8N427 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NME8Q8N427 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.03■□□□□ 0.96
NME8Q8N427 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.03■□□□□ 0.96
NME8Q8N427 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.03■□□□□ 0.96
NME8Q8N427 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 AC091076.1-201ENST00000610741 619 ntBASIC21.03■□□□□ 0.96
NME8Q8N427 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.03■□□□□ 0.96
NME8Q8N427 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
NME8Q8N427 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NME8Q8N427 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NME8Q8N427 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
NME8Q8N427 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.02■□□□□ 0.96
NME8Q8N427 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.02■□□□□ 0.96
NME8Q8N427 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.02■□□□□ 0.96
NME8Q8N427 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.02■□□□□ 0.96
NME8Q8N427 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.02■□□□□ 0.96
NME8Q8N427 NEK4P2-201ENST00000580004 1012 ntBASIC21.02■□□□□ 0.96
NME8Q8N427 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.02■□□□□ 0.96
NME8Q8N427 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
NME8Q8N427 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
NME8Q8N427 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NME8Q8N427 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NME8Q8N427 LINC01521-201ENST00000504184 1943 ntBASIC21.02■□□□□ 0.95
NME8Q8N427 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.02■□□□□ 0.95
NME8Q8N427 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NME8Q8N427 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NME8Q8N427 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.01■□□□□ 0.95
NME8Q8N427 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.01■□□□□ 0.95
NME8Q8N427 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.01■□□□□ 0.95
NME8Q8N427 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.01■□□□□ 0.95
NME8Q8N427 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NME8Q8N427 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.01■□□□□ 0.95
NME8Q8N427 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.01■□□□□ 0.95
NME8Q8N427 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.01■□□□□ 0.95
NME8Q8N427 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.01■□□□□ 0.95
NME8Q8N427 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.01■□□□□ 0.95
NME8Q8N427 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.01■□□□□ 0.95
NME8Q8N427 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.01■□□□□ 0.95
NME8Q8N427 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms