Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 AL049812.1-201ENST00000432563 2267 ntBASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 TSPY23P-201ENST00000440136 739 ntBASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 AL031985.4-201ENST00000642138 673 ntBASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 AC026271.3-201ENST00000571884 352 ntBASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 TMEM191A-211ENST00000637163 1067 ntBASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC65Q8IXS2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC65Q8IXS2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC65Q8IXS2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC65Q8IXS2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC65Q8IXS2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC65Q8IXS2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms