Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 LINC01126-201ENST00000623515 1646 ntBASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CROCCP3Q8IVE0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 FP475955.4-201ENST00000623131 1990 ntBASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 AL358852.1-201ENST00000623174 1268 ntBASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 AL118508.1-201ENST00000613502 2345 ntBASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CROCCP3Q8IVE0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 AC134043.2-201ENST00000624206 2238 ntBASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CROCCP3Q8IVE0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 AP001271.2-201ENST00000624018 1556 ntBASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 PGM5P4-201ENST00000421970 445 ntBASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 AC138907.5-202ENST00000569484 235 ntBASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 MIR4767-201ENST00000582827 78 ntBASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 AL512353.2-201ENST00000448759 1962 ntBASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CROCCP3Q8IVE0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms