Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM50Q86XT4 AC125437.2-201ENST00000625180 2167 ntBASIC21.33■■□□□ 1
TRIM50Q86XT4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM50Q86XT4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
TRIM50Q86XT4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TRIM50Q86XT4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.32■■□□□ 1
TRIM50Q86XT4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
TRIM50Q86XT4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
TRIM50Q86XT4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.32■■□□□ 1
TRIM50Q86XT4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.32■■□□□ 1
TRIM50Q86XT4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
TRIM50Q86XT4 FAM8A6P-201ENST00000407496 1135 ntBASIC21.32■■□□□ 1
TRIM50Q86XT4 TSPY5P-201ENST00000426936 936 ntBASIC21.32■■□□□ 1
TRIM50Q86XT4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRIM50Q86XT4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.32■■□□□ 1
TRIM50Q86XT4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.32■■□□□ 1
TRIM50Q86XT4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
TRIM50Q86XT4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
TRIM50Q86XT4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM50Q86XT4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.31■■□□□ 1
TRIM50Q86XT4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.31■■□□□ 1
TRIM50Q86XT4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.31■■□□□ 1
TRIM50Q86XT4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.31■■□□□ 1
TRIM50Q86XT4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.31■■□□□ 1
TRIM50Q86XT4 AL441883.1-201ENST00000566170 1045 ntBASIC21.31■■□□□ 1
TRIM50Q86XT4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.31■■□□□ 1
TRIM50Q86XT4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.31■■□□□ 1
TRIM50Q86XT4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRIM50Q86XT4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRIM50Q86XT4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRIM50Q86XT4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.31■■□□□ 1
TRIM50Q86XT4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM50Q86XT4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRIM50Q86XT4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.3■■□□□ 1
TRIM50Q86XT4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.3■■□□□ 1
TRIM50Q86XT4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.3■■□□□ 1
TRIM50Q86XT4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM50Q86XT4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM50Q86XT4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
TRIM50Q86XT4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TRIM50Q86XT4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.3■■□□□ 1
TRIM50Q86XT4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.3■■□□□ 1
TRIM50Q86XT4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.3■■□□□ 1
TRIM50Q86XT4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM50Q86XT4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.3■■□□□ 1
TRIM50Q86XT4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.3■■□□□ 1
TRIM50Q86XT4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.3■■□□□ 1
TRIM50Q86XT4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM50Q86XT4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM50Q86XT4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.3■■□□□ 1
TRIM50Q86XT4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TRIM50Q86XT4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.3■■□□□ 1
TRIM50Q86XT4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRIM50Q86XT4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM50Q86XT4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM50Q86XT4 SLC25A24-204ENST00000569674 2357 ntBASIC21.3■■□□□ 1
TRIM50Q86XT4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.29■■□□□ 1
TRIM50Q86XT4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.29■■□□□ 1
TRIM50Q86XT4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.29■■□□□ 1
TRIM50Q86XT4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.29■■□□□ 1
TRIM50Q86XT4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.29■■□□□ 1
TRIM50Q86XT4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.29■■□□□ 1
TRIM50Q86XT4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.29■■□□□ 1
TRIM50Q86XT4 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.29■■□□□ 1
TRIM50Q86XT4 AC092647.4-201ENST00000457211 535 ntBASIC21.29■■□□□ 1
TRIM50Q86XT4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.29■■□□□ 1
TRIM50Q86XT4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.29■■□□□ 1
TRIM50Q86XT4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.29■■□□□ 1
TRIM50Q86XT4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.29■■□□□ 1
TRIM50Q86XT4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.29■■□□□ 1
TRIM50Q86XT4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.29■■□□□ 1
TRIM50Q86XT4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms