Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 AC005181.1-201ENST00000604782 1256 ntBASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 AC068880.1-201ENST00000507289 2297 ntBASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
LRRTM1Q86UE6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM1Q86UE6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 YBX1P10-201ENST00000444752 975 ntBASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM1Q86UE6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms