Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.08■□□□□ 0.64
LDB1Q86U70 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LDB1Q86U70 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LDB1Q86U70 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LDB1Q86U70 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB1Q86U70 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.07■□□□□ 0.64
LDB1Q86U70 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LDB1Q86U70 KRT8P41-201ENST00000533985 1514 ntBASIC19.07■□□□□ 0.64
LDB1Q86U70 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.07■□□□□ 0.64
LDB1Q86U70 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 ABHD17AP1-201ENST00000358206 933 ntBASIC19.07■□□□□ 0.64
LDB1Q86U70 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LDB1Q86U70 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.07■□□□□ 0.64
LDB1Q86U70 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.07■□□□□ 0.64
LDB1Q86U70 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.07■□□□□ 0.64
LDB1Q86U70 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LDB1Q86U70 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.07■□□□□ 0.64
LDB1Q86U70 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
LDB1Q86U70 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.07■□□□□ 0.64
LDB1Q86U70 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB1Q86U70 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB1Q86U70 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LDB1Q86U70 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.06■□□□□ 0.64
LDB1Q86U70 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB1Q86U70 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB1Q86U70 NIFKP9-201ENST00000419265 221 ntBASIC19.06■□□□□ 0.64
LDB1Q86U70 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 AL158047.1-201ENST00000445918 881 ntBASIC19.06■□□□□ 0.64
LDB1Q86U70 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 AP002982.1-201ENST00000492365 877 ntBASIC19.06■□□□□ 0.64
LDB1Q86U70 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.06■□□□□ 0.64
LDB1Q86U70 Z85996.1-201ENST00000494644 937 ntBASIC19.06■□□□□ 0.64
LDB1Q86U70 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 AC142381.4-202ENST00000563973 229 ntBASIC19.06■□□□□ 0.64
LDB1Q86U70 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.06■□□□□ 0.64
LDB1Q86U70 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB1Q86U70 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB1Q86U70 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.06■□□□□ 0.64
LDB1Q86U70 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB1Q86U70 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.06■□□□□ 0.64
LDB1Q86U70 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB1Q86U70 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB1Q86U70 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LDB1Q86U70 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LDB1Q86U70 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.05■□□□□ 0.64
LDB1Q86U70 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.05■□□□□ 0.64
LDB1Q86U70 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.05■□□□□ 0.64
LDB1Q86U70 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
LDB1Q86U70 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.05■□□□□ 0.64
LDB1Q86U70 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LDB1Q86U70 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.05■□□□□ 0.64
LDB1Q86U70 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.05■□□□□ 0.64
LDB1Q86U70 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB1Q86U70 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.04■□□□□ 0.64
LDB1Q86U70 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LDB1Q86U70 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LDB1Q86U70 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms