Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 GUSBP6-202ENST00000438529 1198 ntBASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PNMA6B-201ENST00000538162 1200 ntBASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 AL138781.1-201ENST00000566567 1274 ntBASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 MYC-209ENST00000641252 345 ntBASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 AL020996.1-203ENST00000536896 2307 ntBASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL55Q7Z7F7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms