Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 PNMA6B-201ENST00000538162 1200 ntBASIC17.6■□□□□ 0.41
TUBA1AQ71U36 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 AC060766.5-201ENST00000590539 871 ntBASIC17.6■□□□□ 0.41
TUBA1AQ71U36 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TUBA1AQ71U36 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 AL354751.1-201ENST00000412768 1863 ntBASIC17.59■□□□□ 0.41
TUBA1AQ71U36 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 TSPY20P-201ENST00000450910 630 ntBASIC17.59■□□□□ 0.41
TUBA1AQ71U36 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 AC006557.6-201ENST00000623071 864 ntBASIC17.59■□□□□ 0.41
TUBA1AQ71U36 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBA1AQ71U36 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TUBA1AQ71U36 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUBA1AQ71U36 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 HLA-B-256ENST00000639848 1089 ntBASIC17.58■□□□□ 0.4
TUBA1AQ71U36 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TUBA1AQ71U36 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.57■□□□□ 0.4
TUBA1AQ71U36 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms