Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 PRORSD1P-202ENST00000563365 2154 ntBASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 AC060766.5-201ENST00000590539 871 ntBASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 AL359736.2-201ENST00000621992 437 ntBASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXR1Q6PIV2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 PCDHA12-202ENST00000613593 2588 ntBASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 UBE2SP1-201ENST00000450587 669 ntBASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 FAM21FP-204ENST00000608637 956 ntBASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 AL589743.5-201ENST00000616611 1050 ntBASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXR1Q6PIV2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXR1Q6PIV2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 AC092368.3-202ENST00000574180 1591 ntBASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 AC124067.4-201ENST00000519691 2379 ntBASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms