Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 FITM1-202ENST00000559294 800 ntBASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 TREX1-205ENST00000625293 1783 ntBASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.92■□□□□ 0.78
RFWD3Q6PCD5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 AC097488.1-201ENST00000507834 756 ntBASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 CYP2D8P-201ENST00000433633 1490 ntBASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RFWD3Q6PCD5 ZNF815P-204ENST00000434898 1737 ntBASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 AC104417.2-201ENST00000562989 1793 ntBASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 CRYGFP-201ENST00000418459 633 ntBASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 SLC25A1P4-201ENST00000567977 778 ntBASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 KRT8P41-201ENST00000533985 1514 ntBASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD3Q6PCD5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RFWD3Q6PCD5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFWD3Q6PCD5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFWD3Q6PCD5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms