Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 TSPY20P-201ENST00000450910 630 ntBASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF549Q6P9A3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 Z85996.1-201ENST00000494644 937 ntBASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 RPPH1-201ENST00000516869 333 ntBASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF549Q6P9A3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 TSPY23P-201ENST00000440136 739 ntBASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF549Q6P9A3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF549Q6P9A3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 NIFKP9-201ENST00000419265 221 ntBASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 RPS2P4-201ENST00000476944 856 ntBASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 AL445675.2-201ENST00000620291 557 ntBASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms