Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 AC135050.7-201ENST00000624508 2218 ntBASIC19.27■□□□□ 0.68
LGSNQ5TDP6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 BX276092.2-201ENST00000417668 665 ntBASIC19.27■□□□□ 0.68
LGSNQ5TDP6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LGSNQ5TDP6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LGSNQ5TDP6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.27■□□□□ 0.67
LGSNQ5TDP6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LGSNQ5TDP6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LGSNQ5TDP6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LGSNQ5TDP6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LGSNQ5TDP6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LGSNQ5TDP6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 FEM1AP3-201ENST00000403722 1741 ntBASIC19.26■□□□□ 0.67
LGSNQ5TDP6 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.26■□□□□ 0.67
LGSNQ5TDP6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 AF201337.1-201ENST00000520239 748 ntBASIC19.26■□□□□ 0.67
LGSNQ5TDP6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 AL390961.4-201ENST00000623958 2535 ntBASIC19.26■□□□□ 0.67
LGSNQ5TDP6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 AL512353.2-201ENST00000448759 1962 ntBASIC19.26■□□□□ 0.67
LGSNQ5TDP6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LGSNQ5TDP6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 RPS2P52-201ENST00000469610 820 ntBASIC19.25■□□□□ 0.67
LGSNQ5TDP6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 AC105036.2-201ENST00000569468 176 ntBASIC19.25■□□□□ 0.67
LGSNQ5TDP6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 AL121906.2-201ENST00000621597 723 ntBASIC19.25■□□□□ 0.67
LGSNQ5TDP6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LGSNQ5TDP6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.24■□□□□ 0.67
LGSNQ5TDP6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms