Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 BNIP3P18-201ENST00000593976 575 ntBASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 MTDHP3-201ENST00000594186 672 ntBASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 MCCD1P2-201ENST00000423228 335 ntBASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL13A1Q5TAT6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 ELK2BP-201ENST00000415014 1224 ntBASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.53■■□□□ 1.04
COL13A1Q5TAT6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 GUSBP12-201ENST00000513727 720 ntBASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 UNC93B6-202ENST00000528242 690 ntBASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 MIR3917-201ENST00000580971 93 ntBASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL13A1Q5TAT6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
COL13A1Q5TAT6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
COL13A1Q5TAT6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL13A1Q5TAT6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COL13A1Q5TAT6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
COL13A1Q5TAT6 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 AC005498.2-205ENST00000593218 784 ntBASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 AC027612.4-201ENST00000605371 583 ntBASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 KRT8P11-201ENST00000409686 1436 ntBASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL13A1Q5TAT6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms