Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5Q00535 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5Q00535 MIPEPP3-201ENST00000412105 444 ntBASIC17.25■□□□□ 0.35
CDK5Q00535 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.25■□□□□ 0.35
CDK5Q00535 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK5Q00535 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5Q00535 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5Q00535 AC080038.1-201ENST00000611274 1154 ntBASIC17.25■□□□□ 0.35
CDK5Q00535 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5Q00535 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5Q00535 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5Q00535 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK5Q00535 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5Q00535 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.24■□□□□ 0.35
CDK5Q00535 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDK5Q00535 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDK5Q00535 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5Q00535 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5Q00535 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5Q00535 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5Q00535 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5Q00535 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDK5Q00535 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5Q00535 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDK5Q00535 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5Q00535 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5Q00535 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CDK5Q00535 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5Q00535 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 CDCA4P2-201ENST00000441182 718 ntBASIC17.23■□□□□ 0.35
CDK5Q00535 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5Q00535 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.23■□□□□ 0.35
CDK5Q00535 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CDK5Q00535 AC091874.3-201ENST00000512672 1195 ntBASIC17.23■□□□□ 0.35
CDK5Q00535 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDK5Q00535 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.23■□□□□ 0.35
CDK5Q00535 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDK5Q00535 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5Q00535 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK5Q00535 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDK5Q00535 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDK5Q00535 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5Q00535 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5Q00535 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5Q00535 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5Q00535 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5Q00535 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5Q00535 AC073592.3-201ENST00000625118 1834 ntBASIC17.22■□□□□ 0.35
CDK5Q00535 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDK5Q00535 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5Q00535 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5Q00535 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5Q00535 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5Q00535 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5Q00535 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK5Q00535 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms