Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK3Q00526 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK3Q00526 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK3Q00526 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK3Q00526 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 ATP5G1P1-201ENST00000448724 379 ntBASIC18.81■□□□□ 0.6
CDK3Q00526 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 AP003041.3-201ENST00000527151 707 ntBASIC18.81■□□□□ 0.6
CDK3Q00526 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK3Q00526 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 TEX21P-204ENST00000641479 1693 ntBASIC18.81■□□□□ 0.6
CDK3Q00526 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK3Q00526 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK3Q00526 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK3Q00526 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK3Q00526 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK3Q00526 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK3Q00526 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CDK3Q00526 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK3Q00526 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK3Q00526 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK3Q00526 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.79■□□□□ 0.6
CDK3Q00526 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.79■□□□□ 0.6
CDK3Q00526 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.79■□□□□ 0.6
CDK3Q00526 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.79■□□□□ 0.6
CDK3Q00526 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDK3Q00526 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK3Q00526 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDK3Q00526 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
CDK3Q00526 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDK3Q00526 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 MIR1224-201ENST00000408193 85 ntBASIC18.78■□□□□ 0.6
CDK3Q00526 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CDK3Q00526 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
CDK3Q00526 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDK3Q00526 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CDK3Q00526 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK3Q00526 AC093484.2-201ENST00000580996 2166 ntBASIC18.78■□□□□ 0.6
CDK3Q00526 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK3Q00526 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDK3Q00526 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK3Q00526 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK3Q00526 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK3Q00526 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK3Q00526 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms