Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX6-1P78426 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NKX6-1P78426 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX6-1P78426 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX6-1P78426 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.81■□□□□ 0.28
NKX6-1P78426 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 C2orf69P3-201ENST00000565542 1120 ntBASIC16.81■□□□□ 0.28
NKX6-1P78426 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.81■□□□□ 0.28
NKX6-1P78426 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX6-1P78426 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.81■□□□□ 0.28
NKX6-1P78426 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX6-1P78426 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX6-1P78426 KRT8P8-201ENST00000434750 1448 ntBASIC16.8■□□□□ 0.28
NKX6-1P78426 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX6-1P78426 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.8■□□□□ 0.28
NKX6-1P78426 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 AC010203.1-204ENST00000548782 407 ntBASIC16.8■□□□□ 0.28
NKX6-1P78426 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX6-1P78426 AL445675.2-201ENST00000620291 557 ntBASIC16.8■□□□□ 0.28
NKX6-1P78426 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
NKX6-1P78426 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX6-1P78426 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NKX6-1P78426 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
NKX6-1P78426 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NKX6-1P78426 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.79■□□□□ 0.28
NKX6-1P78426 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NKX6-1P78426 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.79■□□□□ 0.28
NKX6-1P78426 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
NKX6-1P78426 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.79■□□□□ 0.28
NKX6-1P78426 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX6-1P78426 AL031985.4-201ENST00000642138 673 ntBASIC16.79■□□□□ 0.28
NKX6-1P78426 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NKX6-1P78426 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 AC112907.3-201ENST00000577781 2400 ntBASIC16.79■□□□□ 0.28
NKX6-1P78426 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX6-1P78426 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NKX6-1P78426 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX6-1P78426 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-1P78426 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NKX6-1P78426 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
NKX6-1P78426 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX6-1P78426 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-1P78426 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms