Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB11AP62491 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RAB11AP62491 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB11AP62491 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB11AP62491 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
RAB11AP62491 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB11AP62491 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB11AP62491 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB11AP62491 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB11AP62491 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB11AP62491 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB11AP62491 C2orf69P4-201ENST00000565394 541 ntBASIC15.52■□□□□ 0.08
RAB11AP62491 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB11AP62491 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB11AP62491 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB11AP62491 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB11AP62491 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB11AP62491 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB11AP62491 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB11AP62491 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB11AP62491 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.52■□□□□ 0.07
RAB11AP62491 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB11AP62491 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.52■□□□□ 0.07
RAB11AP62491 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RAB11AP62491 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB11AP62491 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB11AP62491 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB11AP62491 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.51■□□□□ 0.07
RAB11AP62491 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB11AP62491 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RAB11AP62491 AC137761.2-201ENST00000561729 223 ntBASIC15.51■□□□□ 0.07
RAB11AP62491 AC145350.3-201ENST00000569033 163 ntBASIC15.51■□□□□ 0.07
RAB11AP62491 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.51■□□□□ 0.07
RAB11AP62491 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB11AP62491 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
RAB11AP62491 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB11AP62491 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RAB11AP62491 AC018553.1-201ENST00000616682 1458 ntBASIC15.51■□□□□ 0.07
RAB11AP62491 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB11AP62491 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
RAB11AP62491 AC068338.2-201ENST00000563278 1430 ntBASIC15.51■□□□□ 0.07
RAB11AP62491 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.51■□□□□ 0.07
RAB11AP62491 AL161938.1-201ENST00000569833 2180 ntBASIC15.51■□□□□ 0.07
RAB11AP62491 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB11AP62491 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB11AP62491 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB11AP62491 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
RAB11AP62491 AC141586.3-201ENST00000562166 1838 ntBASIC15.5■□□□□ 0.07
RAB11AP62491 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB11AP62491 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 AC034268.1-201ENST00000441047 882 ntBASIC15.5■□□□□ 0.07
RAB11AP62491 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB11AP62491 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB11AP62491 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB11AP62491 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB11AP62491 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RAB11AP62491 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB11AP62491 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RAB11AP62491 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB11AP62491 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB11AP62491 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB11AP62491 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB11AP62491 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB11AP62491 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB11AP62491 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB11AP62491 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms