Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.73■□□□□ 0.75
EIF3EP60228 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 AL160286.2-201ENST00000567150 934 ntBASIC19.73■□□□□ 0.75
EIF3EP60228 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.73■□□□□ 0.75
EIF3EP60228 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3EP60228 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3EP60228 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 AC020763.4-201ENST00000623414 4170 ntBASIC19.72■□□□□ 0.75
EIF3EP60228 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3EP60228 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3EP60228 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.72■□□□□ 0.75
EIF3EP60228 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.72■□□□□ 0.75
EIF3EP60228 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.72■□□□□ 0.75
EIF3EP60228 KRT18P6-201ENST00000555540 1265 ntBASIC19.72■□□□□ 0.75
EIF3EP60228 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.72■□□□□ 0.75
EIF3EP60228 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 AL023875.1-201ENST00000640777 796 ntBASIC19.72■□□□□ 0.75
EIF3EP60228 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
EIF3EP60228 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3EP60228 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3EP60228 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3EP60228 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
EIF3EP60228 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.71■□□□□ 0.75
EIF3EP60228 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.71■□□□□ 0.75
EIF3EP60228 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.71■□□□□ 0.75
EIF3EP60228 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.71■□□□□ 0.75
EIF3EP60228 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
EIF3EP60228 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.71■□□□□ 0.75
EIF3EP60228 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.71■□□□□ 0.75
EIF3EP60228 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3EP60228 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.71■□□□□ 0.75
EIF3EP60228 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.7■□□□□ 0.74
EIF3EP60228 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.7■□□□□ 0.74
EIF3EP60228 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EIF3EP60228 KRASP1-201ENST00000407852 552 ntBASIC19.7■□□□□ 0.74
EIF3EP60228 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
EIF3EP60228 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.7■□□□□ 0.74
EIF3EP60228 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.7■□□□□ 0.74
EIF3EP60228 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.7■□□□□ 0.74
EIF3EP60228 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.7■□□□□ 0.74
EIF3EP60228 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
EIF3EP60228 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
EIF3EP60228 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
EIF3EP60228 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3EP60228 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
EIF3EP60228 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.69■□□□□ 0.74
EIF3EP60228 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
EIF3EP60228 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EIF3EP60228 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
EIF3EP60228 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
EIF3EP60228 ESRRAP1-201ENST00000400596 1257 ntBASIC19.69■□□□□ 0.74
EIF3EP60228 AC239809.2-201ENST00000415381 517 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms