Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
AP3M2P53677 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3M2P53677 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
AP3M2P53677 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AP3M2P53677 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.57■□□□□ 0.88
AP3M2P53677 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AP3M2P53677 MFAP1P1-201ENST00000442257 1255 ntBASIC20.57■□□□□ 0.88
AP3M2P53677 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.57■□□□□ 0.88
AP3M2P53677 AL355075.4-201ENST00000554988 638 ntBASIC20.57■□□□□ 0.88
AP3M2P53677 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.57■□□□□ 0.88
AP3M2P53677 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3M2P53677 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3M2P53677 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.57■□□□□ 0.88
AP3M2P53677 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M2P53677 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.56■□□□□ 0.88
AP3M2P53677 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3M2P53677 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.56■□□□□ 0.88
AP3M2P53677 FITM1-202ENST00000559294 800 ntBASIC20.56■□□□□ 0.88
AP3M2P53677 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.56■□□□□ 0.88
AP3M2P53677 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.56■□□□□ 0.88
AP3M2P53677 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
AP3M2P53677 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3M2P53677 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3M2P53677 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.56■□□□□ 0.88
AP3M2P53677 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3M2P53677 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M2P53677 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
AP3M2P53677 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
AP3M2P53677 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M2P53677 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M2P53677 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3M2P53677 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3M2P53677 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AP3M2P53677 CRYGFP-201ENST00000418459 633 ntBASIC20.55■□□□□ 0.88
AP3M2P53677 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3M2P53677 CA15P1-201ENST00000481698 905 ntBASIC20.55■□□□□ 0.88
AP3M2P53677 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3M2P53677 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M2P53677 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.55■□□□□ 0.88
AP3M2P53677 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
AP3M2P53677 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M2P53677 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3M2P53677 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.55■□□□□ 0.88
AP3M2P53677 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
AP3M2P53677 AC079598.2-202ENST00000546624 1451 ntBASIC20.55■□□□□ 0.88
AP3M2P53677 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3M2P53677 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M2P53677 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M2P53677 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3M2P53677 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3M2P53677 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.54■□□□□ 0.88
AP3M2P53677 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
AP3M2P53677 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 AL161938.1-201ENST00000569833 2180 ntBASIC20.54■□□□□ 0.88
AP3M2P53677 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
AP3M2P53677 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3M2P53677 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
AP3M2P53677 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.54■□□□□ 0.88
AP3M2P53677 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3M2P53677 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3M2P53677 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M2P53677 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms