Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17■□□□□ 0.31
SLC25A1P53007 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.99■□□□□ 0.31
SLC25A1P53007 NBPF21P-201ENST00000425093 1451 ntBASIC16.99■□□□□ 0.31
SLC25A1P53007 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC25A1P53007 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC25A1P53007 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SLC25A1P53007 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC25A1P53007 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.99■□□□□ 0.31
SLC25A1P53007 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC25A1P53007 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC25A1P53007 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.99■□□□□ 0.31
SLC25A1P53007 UNC93B5-201ENST00000530315 699 ntBASIC16.99■□□□□ 0.31
SLC25A1P53007 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC25A1P53007 HLA-A-209ENST00000638375 975 ntBASIC16.99■□□□□ 0.31
SLC25A1P53007 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
SLC25A1P53007 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC25A1P53007 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC25A1P53007 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC25A1P53007 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC25A1P53007 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC25A1P53007 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC25A1P53007 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SLC25A1P53007 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC25A1P53007 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.98■□□□□ 0.31
SLC25A1P53007 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC25A1P53007 AC104771.1-201ENST00000603335 964 ntBASIC16.98■□□□□ 0.31
SLC25A1P53007 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SLC25A1P53007 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC25A1P53007 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC25A1P53007 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC25A1P53007 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC25A1P53007 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC25A1P53007 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 TSPY23P-201ENST00000440136 739 ntBASIC16.97■□□□□ 0.31
SLC25A1P53007 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC25A1P53007 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC25A1P53007 AC004264.1-201ENST00000608354 794 ntBASIC16.97■□□□□ 0.31
SLC25A1P53007 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC25A1P53007 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC25A1P53007 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
SLC25A1P53007 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC25A1P53007 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC25A1P53007 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC25A1P53007 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC25A1P53007 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC25A1P53007 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.96■□□□□ 0.31
SLC25A1P53007 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC25A1P53007 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC25A1P53007 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC25A1P53007 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC25A1P53007 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms