Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.62■■□□□ 1.05
USP11P51784 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.62■■□□□ 1.05
USP11P51784 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
USP11P51784 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
USP11P51784 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.62■■□□□ 1.05
USP11P51784 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.62■■□□□ 1.05
USP11P51784 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 AC012306.2-201ENST00000609350 630 ntBASIC21.62■■□□□ 1.05
USP11P51784 AL023803.3-201ENST00000615559 522 ntBASIC21.62■■□□□ 1.05
USP11P51784 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.62■■□□□ 1.05
USP11P51784 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.62■■□□□ 1.05
USP11P51784 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.62■■□□□ 1.05
USP11P51784 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.61■■□□□ 1.05
USP11P51784 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
USP11P51784 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 AC211429.1-201ENST00000415277 523 ntBASIC21.61■■□□□ 1.05
USP11P51784 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.61■■□□□ 1.05
USP11P51784 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.61■■□□□ 1.05
USP11P51784 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.61■■□□□ 1.05
USP11P51784 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.61■■□□□ 1.05
USP11P51784 AC097493.4-201ENST00000641197 219 ntBASIC21.61■■□□□ 1.05
USP11P51784 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.61■■□□□ 1.05
USP11P51784 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.61■■□□□ 1.05
USP11P51784 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.61■■□□□ 1.05
USP11P51784 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP11P51784 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
USP11P51784 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.6■■□□□ 1.05
USP11P51784 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.6■■□□□ 1.05
USP11P51784 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.6■■□□□ 1.05
USP11P51784 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
USP11P51784 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.6■■□□□ 1.05
USP11P51784 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP11P51784 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.6■■□□□ 1.05
USP11P51784 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
USP11P51784 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.6■■□□□ 1.05
USP11P51784 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.6■■□□□ 1.05
USP11P51784 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
USP11P51784 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.59■■□□□ 1.05
USP11P51784 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.59■■□□□ 1.05
USP11P51784 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.59■■□□□ 1.05
USP11P51784 TSPY17P-201ENST00000450329 467 ntBASIC21.59■■□□□ 1.05
USP11P51784 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.59■■□□□ 1.05
USP11P51784 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.59■■□□□ 1.05
USP11P51784 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
USP11P51784 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.59■■□□□ 1.05
USP11P51784 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.59■■□□□ 1.05
USP11P51784 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.59■■□□□ 1.05
USP11P51784 AC145285.6-201ENST00000604632 637 ntBASIC21.59■■□□□ 1.05
USP11P51784 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.59■■□□□ 1.05
USP11P51784 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP11P51784 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.58■■□□□ 1.05
USP11P51784 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.58■■□□□ 1.05
USP11P51784 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.58■■□□□ 1.05
USP11P51784 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.58■■□□□ 1.05
USP11P51784 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
USP11P51784 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP11P51784 CCR12P-201ENST00000446203 998 ntBASIC21.58■■□□□ 1.05
USP11P51784 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms