Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.12■□□□□ 0.81
TUBP50607 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TUBP50607 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.12■□□□□ 0.81
TUBP50607 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TUBP50607 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TUBP50607 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 MFAP1P1-201ENST00000442257 1255 ntBASIC20.12■□□□□ 0.81
TUBP50607 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 EGLN1P1-201ENST00000531623 762 ntBASIC20.12■□□□□ 0.81
TUBP50607 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TUBP50607 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.12■□□□□ 0.81
TUBP50607 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBP50607 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TUBP50607 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.12■□□□□ 0.81
TUBP50607 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBP50607 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.11■□□□□ 0.81
TUBP50607 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.11■□□□□ 0.81
TUBP50607 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TUBP50607 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TUBP50607 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.11■□□□□ 0.81
TUBP50607 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.11■□□□□ 0.81
TUBP50607 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TUBP50607 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.11■□□□□ 0.81
TUBP50607 AC005363.2-201ENST00000618631 242 ntBASIC20.11■□□□□ 0.81
TUBP50607 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.11■□□□□ 0.81
TUBP50607 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TUBP50607 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 LINC01465-201ENST00000408887 1940 ntBASIC20.11■□□□□ 0.81
TUBP50607 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBP50607 TREX1-205ENST00000625293 1783 ntBASIC20.11■□□□□ 0.81
TUBP50607 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TUBP50607 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TUBP50607 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.1■□□□□ 0.81
TUBP50607 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 RCN1P1-201ENST00000400413 996 ntBASIC20.1■□□□□ 0.81
TUBP50607 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.1■□□□□ 0.81
TUBP50607 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.1■□□□□ 0.81
TUBP50607 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TUBP50607 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TUBP50607 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TUBP50607 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.1■□□□□ 0.81
TUBP50607 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBP50607 AC018445.3-201ENST00000624177 1945 ntBASIC20.1■□□□□ 0.81
TUBP50607 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBP50607 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TUBP50607 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TUBP50607 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 AL158211.5-201ENST00000623583 2518 ntBASIC20.09■□□□□ 0.81
TUBP50607 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.09■□□□□ 0.81
TUBP50607 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms