Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 AC141586.3-201ENST00000562166 1838 ntBASIC18.17■□□□□ 0.5
PRIM2P49643 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.17■□□□□ 0.5
PRIM2P49643 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PRIM2P49643 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.17■□□□□ 0.5
PRIM2P49643 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.17■□□□□ 0.5
PRIM2P49643 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.17■□□□□ 0.5
PRIM2P49643 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.17■□□□□ 0.5
PRIM2P49643 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.17■□□□□ 0.5
PRIM2P49643 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 AL161938.1-201ENST00000569833 2180 ntBASIC18.17■□□□□ 0.5
PRIM2P49643 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PRIM2P49643 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
PRIM2P49643 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.17■□□□□ 0.5
PRIM2P49643 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRIM2P49643 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.16■□□□□ 0.5
PRIM2P49643 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PRIM2P49643 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 KRT8P8-201ENST00000434750 1448 ntBASIC18.16■□□□□ 0.5
PRIM2P49643 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.16■□□□□ 0.5
PRIM2P49643 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.16■□□□□ 0.5
PRIM2P49643 AP003097.1-201ENST00000530657 1135 ntBASIC18.16■□□□□ 0.5
PRIM2P49643 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.16■□□□□ 0.5
PRIM2P49643 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.16■□□□□ 0.5
PRIM2P49643 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.16■□□□□ 0.5
PRIM2P49643 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRIM2P49643 TEX21P-204ENST00000641479 1693 ntBASIC18.15■□□□□ 0.5
PRIM2P49643 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRIM2P49643 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PRIM2P49643 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRIM2P49643 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PRIM2P49643 KRT17P3-201ENST00000420566 1262 ntBASIC18.15■□□□□ 0.5
PRIM2P49643 TUBB8P6-201ENST00000436895 1288 ntBASIC18.15■□□□□ 0.5
PRIM2P49643 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 KRT18P6-201ENST00000555540 1265 ntBASIC18.15■□□□□ 0.5
PRIM2P49643 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.15■□□□□ 0.5
PRIM2P49643 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.15■□□□□ 0.5
PRIM2P49643 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.15■□□□□ 0.5
PRIM2P49643 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRIM2P49643 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRIM2P49643 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRIM2P49643 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRIM2P49643 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PRIM2P49643 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRIM2P49643 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms