Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC34P49427 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC34P49427 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC34P49427 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC34P49427 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC34P49427 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC34P49427 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC34P49427 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC34P49427 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CDC34P49427 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC34P49427 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC34P49427 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDC34P49427 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDC34P49427 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 AC027612.3-201ENST00000413684 1047 ntBASIC15.11■□□□□ 0.01
CDC34P49427 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC34P49427 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.11■□□□□ 0.01
CDC34P49427 MFSD11-216ENST00000590393 1141 ntBASIC15.11■□□□□ 0.01
CDC34P49427 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CDC34P49427 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC34P49427 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CDC34P49427 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC34P49427 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC34P49427 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC34P49427 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CDC34P49427 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC34P49427 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDC34P49427 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC34P49427 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
CDC34P49427 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC34P49427 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDC34P49427 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC34P49427 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC34P49427 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC34P49427 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.1■□□□□ 0.01
CDC34P49427 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDC34P49427 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC34P49427 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC34P49427 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDC34P49427 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDC34P49427 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC34P49427 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDC34P49427 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC34P49427 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC34P49427 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CDC34P49427 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.09■□□□□ 0.01
CDC34P49427 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
CDC34P49427 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC34P49427 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CDC34P49427 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC34P49427 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CDC34P49427 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC34P49427 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDC34P49427 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC34P49427 ABALON-201ENST00000629058 1903 ntBASIC15.09■□□□□ 0.01
CDC34P49427 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms